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Dense IR primitives from focused cross-pollination

Question: Can we cross-pollinate primitive analogies and get anything that helps a token compression language — denser packing and better inference/thinking — without retraining?

Answer: Yes. Not as free magic, but as a small set of IR codecs that keep recurring when the pool is biased toward representation, schema, codes, diffs, and structured reasoning.

ArtifactPath
Focused generatorcross_pollinate_dense_ir.py
Hybrid runmemory/hybrids_dense_ir.jsonl (seed=7, n=24, all_buckets)
Prior general rationalizationmemory/agent_rationalization.md (PB12 elevated)

1. What we changed in the pool (relevance filter)

Old pool mixed tourism (tides, slime mold, soft_prompt…) that often produced metaphors without a codec hinge.

New pool (58 topics) is only things that can become a grammar, code, packet, or check:

BucketCountExamples (primitives, not slogans)
analogy12map_legend, chess_notation, chemical_formula, musical_score, shipping_container, circuit_schematic, genetic_codon, blueprint, semaphore
cs16compression_dict, diff_patch, protobuf_schema, s_expression_ast, symbol_intern_pool, columnar_table, bytecode_vm, merkle/content-address, type_system, zipper_focus, peg_grammar
ai16tokenization, structured_output, context_distill, prompt_cache, tool_use, CoT, memory_bank, model_router, rag, constitutional_filter
nature14genetic_code_table, enzyme_active_site, stigmergy, synapse_quanta, crystal_lattice, camouflage_sparse, metamorphosis, echolocation

Task pressure on every story: prefer schema/codes/diffs/tables over prose; cut tokens and/or structure thinking; no retrain.

Regenerate anytime:


python cross_pollinate_dense_ir.py --n 24 --seed 7 --mode all_buckets --jsonl memory/hybrids_dense_ir.jsonl

python cross_pollinate_dense_ir.py --list-pool


2. What fell out (auto IR primitives)

From 24 hybrids (auto labels still somewhat sticky — human re-map below):

Auto ir_primitiveRole
typed_schemaFixed short-key STATE language
tool_irTools emit tables/enums/ids
gated_depthSkip deep/RAG when STATE_IR enough
trace_bankExternal one-line IR traces
rag_to_slotsRetrieve → extract facts → drop chunk prose
(also in lexicon)dictionary_codes, patch_ops, content_ids, plan_bytecode, reencode, prefix_share, tables, sparse_budget, checked_plan

Honesty: generator scores still cluster high (~0.98). Trust mechanisms, not scores. Below is the agent re-rationalization.


3. Primitive analogies that actually help the compression language

Each row: analogy → IR move → why tokens and thinking improve.

Tier A — build the language itself (implement first)

Primitive analogyCS/AI hingeCompression-language featureTokensThinking
Map legend / genetic codon / compression_dictintern pool, prompt prefixLEGEND once; body uses T1,E2highmed (less name noise)
Protobuf / blueprint / chemical formulastructured_output, type_systemFixed fields G F D O N X with typeshighhigh (illegal states catchable)
Chess notation / bytecode_vm / musical scoreCoT as moves not essaysPlan bytecode: PLAN: CHK; CALL; IF; COMMITmed–highhigh (steps auditable)
Diff_patch / zipper_focus / ice_core layerscontext_distill, dual memoryPatch ops F+ D~ O- vs full rewritehighmed (focus on change)
Shipping container / columnar table / synapse quantatool_use, structured_outputTabular packets only; typed columnshighmed–high (scan attributes)
Circuit schematic / symbol-and-wirecontent ids + netlistSymbol graph: nodes=ids, edges=relations, no photos/prosehighhigh (structure visible)

Tier B — runtime operators around the language

Primitive analogyFeatureTokensThinking
Content-addressed store / merkle / enzyme pocketContext = {id,title}; fetch(id) only if shape-matches needhighmed
Bloom + model_router + camouflage_sparseEmit only contrast; gate CoT/RAGhighhigh (depth when needed)
Stigmergy / seed_bank / assembly line stationsTRACES as IR log; station-typed stageshighhigh (continuity)
Quorum / self_consistency (gated)Vote only if hard; merge into IR fields not 3 essayslow if always-on; med if gatedhigh if gated
Metamorphosis / homeostasisRebuild denser STATE at milestones; token set-pointhighmed
RAG → slotsExtract into F[], drop chunk prosehighmed

Tier C — weak / reject as primary codec

AnalogyWhy weak for language design
Holography aloneGraceful degradation metaphor; no concrete codec without merkle/ids
Soft continuous nature without packetizationDoesn’t force discrete IR
Always-on multi-sample “holographic vote”Burns tokens; use only gated

4. The compression language these primitives compose into

Name: STATE-IR v1 (mechanism name, not branding).

4.1 Alphabet (what may appear in model context)


PREFIX (cached, stable):

  schema_version

  LEGEND   entity/procedure codes

  TOOLS    short names + arg types

  RULES    emit only IR; no narrative memory



BODY (variable, dense):

  G:  <goal string|code>

  F:  [ fact | fact | ... ]      # facts, short

  D:  [ decision | ... ]

  O:  [ open_question | ... ]

  N:  [ next_op | ... ]          # plan bytecode preferred

  X:  [ constraint | ... ]

  Δ:  [ patch_op | ... ]         # since last commit

  R:  [ {id,title,sc} ... ]      # content refs, not bodies

  K:  keystone_ids               # always pinned

4.2 Operators (verbs of the language)

OpSyntax sketchFrom analogy
internT7=VeryLongName then use T7legend, codon, dict
setG: ... / D:[...]protobuf fields
patchF+ [x] D~ [old→new] O- [done]diff, zipper
planN: [CHK schema, CALL tool, IF fail RETRY, COMMIT]chess, bytecode
refR:[{id:a3f,title:auth,sc:.81}]merkle, CAS
fetchtool fetch(a3f)→≤Mecholocation, enzyme
extractRAG chunk → F+ [...] then drop chunkcamouflage_sparse
traceappend D:/F: line to bankstigmergy
gateif hard→ plan+crit else shortbloom, router, quorum
reencodemilestone: rebuild G/F/D/O from verified onlymetamorphosis
checktype/invariant pass before committype_system, constitutional

4.3 Why this helps inference / thinking (not only shorter prompts)

  1. Attention has less junk — fewer filler tokens, more weight on constraints and open items.
  2. Illegal states are visible — missing X or untyped tool args fail a checklist before “smart” prose hides the bug.
  3. Plans are executable lists — multi-step work becomes N: ops you can verify, not a story that drifts.
  4. Working memory splitF/D stable, Δ fast, R cold storage: classic dual-timescale without weight updates.
  5. Tools ground in the same alphabet — no “tool returned a novel.”

This is not a new neural architecture. It is a representation swap (images-as-tokens class of idea): change the medium of thought, not the weights.


5. Strong hybrid examples (re-read stories, not auto name)

H1 — Chess CoT (IR0005-class)

Topics: chain_of_thought × chess_notation × bloom × enzyme

Primitive: Think in move notation, not paragraphs.

Language feature: N: e4 Nf3 d5 style steps or N: [ANALYZE, BRANCH, PICK, VERIFY].

Gate: bloom/hardness — deep variation only if needed.

Falsify: multi-step tasks; IR-CoT vs prose-CoT; tokens and error rate.

H2 — Schematic netlist memory (IR0001 / IR0020-class)

Topics: circuit_schematic × compression_dict × context_distill × mycorrhizal_trade

Primitive: System as symbols + wires, not description.

Language feature: entities as codes; relations as short edges T1->T2:calls.

Trade: tools exchange minimal goods (rows), not organisms (dumps).

H3 — Assembly + quanta + patch (IR0006)

Topics: assembly_line × memory_bank × diff_patch × synapse_quanta

Primitive: Typed stations write discrete packets into bank as deltas.

Language feature: stage tags ST:retrieve|reason|edit + Δ only between stages.

H4 — Sparse camouflage + router (IR0007)

Topics: camouflage_sparse × schematic × model_router × bloom

Primitive: Emit edges only (what changed / what differs from default).

Language feature: defaults in PREFIX; body is sparse Δ; route model size on hardness.

H5 — Legend + lattice + bytecode (IR0004)

Topics: map_legend × structured_output × crystal_lattice × bytecode

Primitive: Codes occupy fixed lattice slots (schema positions); plan as ops.

Language feature: every turn must fill/update known sites — no free-form memory paragraph.

H6 — Codon table as decode (IR0018-class)

Topics: genetic_code_table × chess × zipper × kv_cache metaphor

Primitive: Fixed lookup table maps short tokens → meaning (legend is the codon table).

User-space analog of kv_cache: reuse PREFIX decode table every turn without resending definitions.


6. Ranked: what to implement for compression language + thinking

RankPrimitive packageEffortToken impactThinking impactWhy
1Typed schema STATE-IR (protobuf/blueprint)hourshighhighSpine of the language
2LEGEND intern codes (map legend/codon/dict)hourshighmedBiggest continuous name tax cut
3Patch Δ + dual SUMMARY (diff/zipper)hourshighmedMulti-turn without essay history
4Plan bytecode (chess/score/vm)hoursmedhighMulti-step reliability
5Tool/table IR + content idshours–dayshighhighStops world-dumps
6Gate depth (bloom/router/sparse)hourshighhighThinking only when paid for
7Trace bank (stigmergy)dayshighhighCross-session
8RAG→slotsdayshighmedRetrieval without paste
9Metamorphic reencodehourshighmedLong-session density

Does NOT need train: all of the above (prompting + orchestrator + tools + files).

Needs train — skip: soft prompts, activation steering, learned compressors (LLMLingua-class) unless you add a separate cheap compressor model later (still not finetuning the main reasoner, but extra infra).


7. Minimal weekend codec (drop-in)


# === PREFIX (prompt-cache stable) ===

STATE-IR v1

Keys: G goal | F facts[] | D decisions[] | O open[] | N next[] | X constraints[] | R refs[] | Δ patches[]

LEGEND: (grow only)

  T1=...

Rules:

  - Never write narrative memory.

  - Prefer codes after definition.

  - Tools return table|json short keys ≤30 lines.

  - Plans in N as ops not essays.

  - On milestone: reencode G,F,D,O from verified facts only.



# === BODY ===

G: ship billing

F: [T1 uses stripe, webhook=/v1/hook]

D: [idempotency=hdr]

O: [PCI]

N: [CHK X, CALL verify_sig, IF fail FIX, COMMIT]

Δ: [F+ rate_limit=100rpm]

R: [{id:c91,title:pci-doc,sc:.7}]

A/B kill tests

  1. Prose chat history vs STATE-IR — tokens_in ↓≥25%, success drop ≤10%.
  2. Prose CoT vs N: bytecode — same quality bar, measure tokens + step errors.
  3. Tool dump vs table IR — tokens ↓≥20%.

8. What this run did / did not show

Did show

  • When the pool is relevant, cross-pollination repeatedly rediscovers the same codecs: legend, schema, diff, table, id, bytecode plan, gate, trace.
  • Nature/analogy help when they force a discrete medium (codon, quanta, schematic, sparse camouflage, stigmergy traces).
  • Token compression language and better thinking are aligned if the IR is typed and plans are lists — not if you only abbreviate randomly.

Did not show

  • A brand-new primitive unknown to CS/AI practice.
  • That auto score≈0.98 ranks quality (still inflated).
  • That denser always means smarter without schema discipline (bad codes → confusion tax).

9. Link back to agent rationalization playbooks

Dense IR primitivePlaybook in agent_rationalization.md
typed_schema + legendPB12 (Top #1)
patch + summaryPB01
prefix + legend cachePB02
gate depthPB04, PB06
plan bytecodePB05
tool/table + idsPB07, PB08
tracesPB09
reencodePB11

10. Next actions

  1. Freeze STATE-IR v1 schema in your agent system prompt (cached).
  2. Implement orchestrator: validate IR each turn; reject prose memory.
  3. Wire tools to table/json only.
  4. Add plan-bytecode mode for hard tasks.
  5. Optional: regenerate more hybrids

python cross_pollinate_dense_ir.py --n 40 --seed 99 --jsonl memory/hybrids_dense_ir_s99.jsonl

and only keep hybrids whose story forces a new op on the language (not another restatement of typed_schema).


Bottom line: cross-pollination with a representation-relevant pool supports building a token compression language. The useful “primitives” are codecs (legend, schema, patch, table, id, bytecode, gate, trace) — known mechanisms, sharp when used as the default medium of thought instead of English essays.